Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888074.1_cds_XP_016442599.1_37845
CDS Infomation

[gene=LOC107768013] [db_xref=GeneID:107768013] [protein=protein SPA1-RELATED 3-like isoform X2] [protein_id=XP_016442599.1] [location=join(20085..20900,21011..21168,22096..23056,23134..23319)] [gbkey=CDS]
Sequence

ATGGAGGGGTCATCTGAATCTGGTTGGGAGGGATCAGATAGTTCCAGGGGTTTGAATTCT
TCAGCTCTTGTAGACAGGAATCCTAGATTTCAAATAAGCAGCATTAGGTCCTCTGGTGAT
GTGTCGCATGATACTGGGTTTGTTCCGGGTAGAAAGGGGAGGGGGAGAATTGAGTCCCCT
CACGTAAATTGTCTTAAAGCCCAAGGTGGGGTTACAGAGGATCGACTCGCTGTGGACCGA
GGTGATCGGAGAATAGACTGTAGTGATGTTAGTTTGAGGCAGTGGCTGGACGACCCGGAG
AGAGCTGTTGACGCTCTTGAATGTTTGCACATATTCTCCCAAATTGTGGAGATTGTAAAC
CTGGCACATTCGCAAGGAATAGTTGTTCATAATGCAAGACCGTCATGTTTTGTCATGTCA
TCTTTCAAACGTATTGCTTTTATTGAATCAGCATCCTGCTCGGATTCAGGGTCTGATTCA
TCAGAAGATGGTTTAAACAGCCAAACTATCGAGTTAAAGGATTCATCCTCAGTTTTGCCT
CATGAGTCGGACGAGCTGGGGAGACAAAGTTCCCAGCTTGAGAAGATTTGCACAAAAGCT
TCTGTAAAAGTATCTGAAAGCCATTGCTTGCAGTCAAGTTCAGGCCATGTGGTGCAGACT
AAAAAGAAGCGACAAGAAGAAGAAAAGAAGCATACCTTCCCAATGAAACAGATATTGCTC
ATGGAAACCAATTGGTACAGTAGTCCAGAAGAGATTGCTGGTGCTCCAAGCTGTTGTGCT
TCAGACATTTATCGTCTTGGAGTCCTCCTATTTGAGCTATTCTGCACCTTCAGTTCACCA
GAAGAGAAAAGCGCAACTATGCATAGTCTAAGACACCGTGTCCTCCCTCCTCAGTTGCTG
TTAAAATGGCCTAAAGAAGCTTCGTTTTGCTTATGGTTACTGCACCCCGAGCCAAGCAGT
AGGCCTAAAATGGGTGAGTTGCTAGAAAGCGAGTTTCTTAATGCTCCAAGAGATGAGTTT
GAAGAACGTGAAGCAGCAATAGAGCTTAGAGAAAAAATAGAGGAGCATGAGTTATTGCTG
GAATTCCTTTTGCTGTGTCAACAGAGAAAGCAGGAGGCTAAGCACAACTTGCATGAGATT
GTATCTTTTTTGTCATCTGACATAGAAGAGGTCTCAAAGATGCAGAAGACCCTTAGAGTC
AAAGGGGGTTCAAATCAGGAACCAGTAAAGGATTTGGATTCGGGGAAGATAAATATTACT
GAGAATGATGATGCTGGGAGCTCTGGATCTAGAAAGAGATATAGGCCAGGCCTTTCTATC
CGCACGACTGAGGAATCGGATGATAATCTAGATGAACGTCAGAAGTCTGAGAAGCATGTT
GAAAACAAAGGGAGCACTCTGGCAAAAAATTCCCGGTTGATGAATAACTTCAGAAAATTG
GAGGCAGCTTATTTCATGACAAGACATAGGGTTATCAAACCAACTGGCAAACCATCGAGT
AGACATTCTCAGGTAAGTGCAGATTGCAGAACTTCAGTAGTAGCAACTGAAAGAATTTCA
GTGAGTAATTTGTCATCAAAAGAGGGGTGCAACGAGGATAGACAGAGTGGATCGATCAGC
TCATTCCTGGAGGGCCTGTGCAAGTATCTATCTTATAGCAAGTTGGAAGTGAAGGCCGAC
TTGAAGCAAGGGGATCTTCTAAATTCTTCCAATCTTGTATGTGCTCTCAGCTTTGATCGT
GATGGTGAATTTTTTGCAACTGCTGGTGTAAATAAGAAGATCAAAGTTTTTGAATATAAT
TCAATTGTAAATGAGGACCGAGATATCCGCTATCCAGTTGTTGAAATGGCTAGTAGATCT
AAGCTAAGCAGCATATGTTGGAATGGCTATATTAAAAGCCAGATCGCTTCAAGTAACTTT
GAAGGTGTGGTGCAGGTATGGGACGTCACAAGAAATCAGCTTTTCATGGAAATGAGAGAA
CATGAAAGGCGCGTCTGGTCTGTTGACTTTTCCGTAGCAGATCCAACCATGTTGGCCAGC
GGGAGTGATGATGGTTCTGTCAAGCTCTGGAATATCAATCAGGCAATTCTAATTTTTGCA
CTTGGTGGATGTCAGCTTTGA

Peptide Sequence

PEP ID

XP_016442599.1
PEP Infomation

PREDICTED: protein SPA1-RELATED 3-like isoform X2 [Nicotiana tabacum]
Sequence

MEGSSESGWEGSDSSRGLNSSALVDRNPRFQISSIRSSGDVSHDTGFVPGRKGRGRIESP
HVNCLKAQGGVTEDRLAVDRGDRRIDCSDVSLRQWLDDPERAVDALECLHIFSQIVEIVN
LAHSQGIVVHNARPSCFVMSSFKRIAFIESASCSDSGSDSSEDGLNSQTIELKDSSSVLP
HESDELGRQSSQLEKICTKASVKVSESHCLQSSSGHVVQTKKKRQEEEKKHTFPMKQILL
METNWYSSPEEIAGAPSCCASDIYRLGVLLFELFCTFSSPEEKSATMHSLRHRVLPPQLL
LKWPKEASFCLWLLHPEPSSRPKMGELLESEFLNAPRDEFEEREAAIELREKIEEHELLL
EFLLLCQQRKQEAKHNLHEIVSFLSSDIEEVSKMQKTLRVKGGSNQEPVKDLDSGKINIT
ENDDAGSSGSRKRYRPGLSIRTTEESDDNLDERQKSEKHVENKGSTLAKNSRLMNNFRKL
EAAYFMTRHRVIKPTGKPSSRHSQVSADCRTSVVATERISVSNLSSKEGCNEDRQSGSIS
SFLEGLCKYLSYSKLEVKADLKQGDLLNSSNLVCALSFDRDGEFFATAGVNKKIKVFEYN
SIVNEDRDIRYPVVEMASRSKLSSICWNGYIKSQIASSNFEGVVQVWDVTRNQLFMEMRE
HERRVWSVDFSVADPTMLASGSDDGSVKLWNINQAILIFALGGCQL

Transcript Sequence

Gene sequence data has not been registered.